Gtr2 S
BLAST sp P53290 GTR2YEAST GTP-binding protein GTR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GTR2 PE=1 SV=1MSLEATDSKAMVLLMGVRRCGKSSICKVVFHNMQPLDTLYLESTSNPSLEHFSTLIDLAVMELPGQLNYFEPSYDSERLFKSVGALVYVIDSQDEYINAITNLAMIIEYAYKVNPSINIEVLIHKVDGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVSFYLTSIFDHSIYEAFSRIVQKLIPELSFLENMLDNLIQHSKIEKAFLFDVNSKIYVSTDSNPVDIQMYEVCSEFIDVTIDLFDLYKAPVLRNSQKSSDKDNVINPRNELQNVSQLANGVIIYLRQMIRGLALVAIIRPNGTDMESCLTVADYNIDIFKKGLEDIWANARASQAKNSIEDDVAlign Format Add to basket Added to basket History. Annotation score:Annotation score:5 out of 5The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome.
Gtr2 Tracks
This score cannot be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.More.Experimental evidence at protein level iThis indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.More. Cited for: LEVEL OF PROTEIN EXPRESSION LARGE SCALE ANALYSIS.Regions Feature keyPosition(s)Description ActionsGraphical viewLengthThis subsection of the Function section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.More.Nucleotide binding iGTP Sequence analysis8Nucleotide binding iGTP By similarity4The Gene Ontology (GO) project provides a set of hierarchical controlled vocabulary split into 3 categories:More.GO - Molecular function i. Source: SGDInferred from Direct AssayUsed to indicate a direct assay for the function, process or component indicated by the GO term.More information in the GO evidence code guideInferred from direct assay i. 'Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.' .
Source: SGDInferred from Mutant PhenotypeDescribes annotations that are concluded from looking at variations or changes in a gene product such as mutations or abnormal levels and includes techniques such as knockouts, overexpression, anti-sense experiments and use of specific protein inhibitors.More information in the GO evidence code guideInferred from mutant phenotype i. Cited for: FUNCTION, IDENTIFICATION IN THE EGO COMPLEX, SUBCELLULAR LOCATION. Source: SGDInferred from Genetic InteractionUsed to describe “traditional” genetic interactions such as suppressors and synthetic lethals as well as other techniques such as functional complementation, rescue experiments, or inferences about a gene drawn from the phenotype of a mutation in a different gene.More information in the GO evidence code guideInferred from genetic interaction i. UniProtKB Keywords constitute a controlled vocabulary with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.More.Keywords i Biological process,Ligand,Enzyme and pathway databasesBioCyc Collection of Pathway/Genome DatabasesBioCyc iReactome - a knowledgebase of biological pathways and processesReactome imTOR signalling Amino acids regulate mTORC1. This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.More.Names & Taxonomy iThis subsection of the Names and taxonomy section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.More.Protein names i.
Ordered Locus Names: YGR163WThis subsection of the Names and taxonomy section provides information on the name(s) of the organism that is the source of the protein sequence.More.Organism iThis subsection of the Names and taxonomy section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.More.Taxonomic identifier iThis subsection of the Names and taxonomy section contains the taxonomic hierarchical classification lineage of the source organism.
It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.More.Taxonomic lineage i› › › › › › › › › › › ›. This subsection of the Names and taxonomy section is present for entries that are part of a proteome, i.e.
Of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.More.Proteomes i.A UniProt proteome can consist of several components. The component name refers to the genomic component encoding a set of proteins.More. Component i: Chromosome VIIOrganism-specific databasesEukaryotic Pathogen Database ResourcesEuPathDB iSaccharomyces Genome DatabaseSGD iGTR2. This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.More.Interaction iThis subsection of the 'Interaction' section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the 'Function' section).More.Subunit structure i.
Cited for: FUNCTION, IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE GSE COMPLEX.This subsection of the 'Interaction section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the IntAct database. It is updated on a monthly basis.
Each binary interaction is displayed on a separate line.More.Binary interactions i WithEntry#Exp.IntActNotes4Protein-protein interaction databasesThe Biological General Repository for Interaction Datasets (BioGrid)BioGrid i, 221 interactorsComplexPortal: manually curated resource of macromolecular complexesComplexPortal iEGO complex GSE complexDatabase of interacting proteinsDIP iProtein interaction database and analysis systemIntAct i, 31 interactorsMolecular INTeraction databaseMINT iSTRING: functional protein association networksSTRING i. Belongs to the. This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight. The information is filed in different subsections. The current subsections and their content are listed below:More.Sequence iThis subsection of the Sequence section indicates if the canonical sequence displayed by default in the entry is complete or not.More.Sequence status i: Complete. 10 20 30 40 50 MSLEATDSKA MVLLMGVRRC GKSSICKVVF HNMQPLDTLY LESTSNPSLE 60 70 80 90 100 HFSTLIDLAV MELPGQLNYF EPSYDSERLF KSVGALVYVI DSQDEYINAI 110 120 130 140 150 TNLAMIIEYA YKVNPSINIE VLIHKVDGLS EDFKVDAQRD IMQRTGEELL 160 170 180 190 200 ELGLDGVQVS FYLTSIFDHS IYEAFSRIVQ KLIPELSFLE NMLDNLIQHS 210 220 230 240 250 KIEKAFLFDV NSKIYVSTDS NPVDIQMYEV CSEFIDVTID LFDLYKAPVL 260 270 280 290 300 RNSQKSSDKD NVINPRNELQ NVSQLANGVI IYLRQMIRGL ALVAIIRPNG 310 320 330 340 TDMESCLTVA DYNIDIFKKG LEDIWANARA SQAKNSIEDD V.
The checksum is a form of redundancy check that is calculatedfrom the sequence. It is useful for tracking sequence updates.It should be noted that while, in theory, two different sequences couldhave the same checksum value, the likelihood that this would happenis extremely low.However UniProtKB may contain entries with identical sequences in caseof multiple genes (paralogs).The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64)using the generator polynomial: x64 + x4 + x3 + x + 1.The algorithm is described in the ISO 3309 standard.Press W.H., Flannery B.P., Teukolsky S.A. And Vetterling W.T.Cyclic redundancy and other checksumsNumerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993))Checksum: i0A0D4D. This section provides general information on the entry.More.Entry information iThis subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.More.Entry name iGTR2YEASTThis subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.More.Accession iPrimary (citable) accession number: P53290 Secondary accession number(s): D6VUU7This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’).
This section contains any relevant information that doesn’t fit in any other defined sectionsMore.Miscellaneous i Keywords - Technical term i, Documents. Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD. Index of protein domains and families. Yeast (Saccharomyces cerevisiae) chromosome VII: entries and gene names. Index of Protein Data Bank (PDB) cross-referencesTools.Core data.Supporting data.Information.